21aa.htm

Table 2 supplement
Sequence comparison between human (h, top line) and mouse (m, bottom line) of the 48 nucleotides upstream (-48/-1) and downstream (+1/+48) the previously (OLD) and the newly (NEW) determined AUG, at nucleotide and amino acid (one-letter code) level.
(- = amino acid mismatch)

DSCR1 OLD

h(+1/+48)   atg gag gag gtg gac ctg cag gac ctg ccc agc gcc acc atc gcc tgt
            ||| ||| ||| ||| || ||| ||| ||| ||| || ||| ||| ||| ||| ||| ||
m(+1/+48)   atg gag gag gtg gat ctg cag gac ctg ccg agc gcc acc atc gcc tgc

M E E V D L Q D L P S A T I A C

M E E V D L Q D L P S A T I A C

h(-48/-1)   gcc gag gcg gac gag ggc ggc ggc gac tgg agc ttc att gac tgc gag
            |   | | |   |   |   ||| ||| ||| ||| ||| ||| ||| || ||| ||| |||
m(-48/-1)   gag ggg gac ggg ggc ggc ggc ggc gac tgg agc ttc atc gac tgc gag

             A   E   A   D   E   G   G   G   D   W   S   F   I   D   C   E
             -   -   -   -   -
             E   G   D   G   G   G   G   G   D   W   S   F   I   D   C   E

DSCR1 NEW

h(+1/+48)   atg gag gac ggc gtg gcc ggt ccc cag ctc ggg gcc gcg gcg gag gcg
            ||| ||| ||| ||| ||| ||| || || | | ||| || |   | | ||| ||| |||
m(+1/+48)   atg gag gac ggc gtg gcc ggg ccg cgg ctc gga gag gtg gcg gag gcg

             M   E   D   G   V   A   G   P   Q   L   G   A   A   A   E   A
                                             -           -   -
             M   E   D   G   V   A   G   P   R   L   G   E   V   A   E   A

h(-48/-1)   aag ccc gga gca gcc cgc tgg ggc gca cag ggt cgc gcg ggc gcg ggg
              | || |   ||   |   |   | |   |   |    |          |    || ||
m(-48/-1)   gcg gcc gcg gcg ccg agt gga gcg gag cta agg gag cgc gcg ccg ggc

             K   P   G   A   A   R   W   G   A   Q   G   R   A   G   A   G
             -   -   -       -   -   -   -   -   -   -   -   -   -   -
             A   A   A   A   P   S   G   A   E   L   R   E   R   A   P   G

***

KIAA0184 OLD

h(+1/+48)   atg cct gga gct aat gta tgt gtt gtg aag tta gaa ggt acc cct tat
            ||| || ||| ||| | | || ||| ||| ||| ||| || || ||| || ||| |||
m(+1/+48)   atg ccc gga gct agt gtg tgt gtt gtg aag gta gat ggt gcc cct tat

             M   P   G   A   N   V   C   V   V   K   L   E   G   T   P   Y
                             -                       -   -       -
             M   P   G   A   S   V   C   V   V   K   V   D   G   A   P   Y

h(-48/-1)   act gaa gaa aag ttg tca gtc ctt act gtt cag gac gtt ggt cag gtg
            ||| || || ||| || || || || ||| ||| ||| || || || ||| |||
m(-48/-1)   act gag gag aag ctg tcg gtt ctc act gtt cag gat gtc ggc cag gtg

T E E K L S V L T V Q D V G Q V

T E E K L S V L T V Q D V G Q V

KIAA0184 NEW

h(+1/+48)   atg gct gac cgc ggg tgc ccg ctg gag gcg gcg ccg ctg cct gcc gag
            ||| || ||| ||| || ||| || ||| ||| ||| ||| ||| ||| || ||| |||
m(+1/+48)   atg gcc gac cgc gga tgc cct ctg gag gcg gcg ccg ctg ccc gcc gag

M A D R G C P L E A A P L P A E

M A D R G C P L E A A P L P A E

h(-48/-1)   agg ccc ggt ccg gtt cca gcc tct gcc cgg acg cta gcc ggc ctg gcc
                 | ||| | |      |   |    | |    | ||| |   |       | | |||
m(-48/-1)   gct gcg ggt ctg cag gcc ccg gtt ggg gga acg cct gag cca ccg gcc

             R   P   G   P   V   P   A   S   A   R   T   L   A   G   L   A
             -   -       -   -   -   -   -   -   -       -   -   -   -
             A   A   G   L   Q   A   P   V   G   G   T   P   E   P   P   A

***

KIAA0539 OLD

h(+1/+48)   atg ctc ctc acc gcc gta cag ctc ctg tac agc cca gaa agc tcc gtg
            |   || ||| |   |||   | || ||| ||| ||   | ||| ||| ||| || | |
m(+1/+48)   act ctg ctc agt gcc aca aag ctc ctg tat ggt cca gaa agc tct ggg

             M   L   L   T   A   V   Q   L   L   Y   S   P   E   S   S   V
             -           -       -   -               -                   -
             T   L   L   S   A   T   K   L   L   Y   G   P   E   S   S   G

h(-48/-1)   gtg aag aag gga ctc aaa ttt cgg tac cag gac cac aca ttt tta aag
            ||| ||| |   ||| ||| ||| ||| ||| ||| || ||| | | || ||| |   |||
m(-48/-1)   gtg aag aca gga ctc aaa ttt cgg tac cat gac ctc acc ttt tgg aag

             V   K   K   G   L   K   F   R   Y   Q   D   H   T   F   L   K
                     -                           -       -           -
             V   K   T   G   L   K   F   R   Y   H   D   L   T   F   W   K

KIAA0539 NEW

h(+1/+48)   atg ggg gtc ccc aag agg aag gcc tcg ggc ggc cag gac ggc gcg gct
            ||| ||| ||| ||| ||| ||| ||| || || |   || |     | || ||| ||
m(+1/+48)   atg ggg gtc ccc aag agg aag gcg tca gag ggt ccc agc agc gcg gcg

             M   G   V   P   K   R   K   A   S   G   G   Q   D   G   A   A
                                                 -       -   -   -
             M   G   V   P   K   R   K   A   S   E   G   P   S   S   A   A

h(-48/-1)   ggg tcc cct cag gtg tgt cgt ttc cgt cgc gct tcc gcc ctc tcg gcc
            | | |     |          |   |        |     |    | |    | | | |||
m(-48/-1)   gcg tgg gtt ttc cga ggg tgc cgt ttt gct ggc ccg gtg gtt tgg gcc

             G   S   P   Q   V   C   R   F   R   R   A   S   A   L   S   A
             -   -   -   -   -   -   -   -   -   -   -   -   -   -   -
             A   W   V   F   R   G   C   R   F   A   G   P   V   V   W   A

***

SON OLD

h(+1/+48)   atg atg tca tct tac gaa cgc tct atg atg tct tat gag cgg tct atg
            ||| ||| ||| ||| || || ||| ||| ||| ||| ||| ||| || || ||| |||
m(+1/+48)   atg atg tca tct tat gag cgc tct atg atg tct tat gaa cgc tct atg

M M S S Y E R S M M S Y E R S M

M M S S Y E R S M M S Y E R S M

h(-48/-1)   tta gca tct aga cgt tct atg atg atg tcc tat gct gca gaa cgt tcc
            ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| ||| |||
m(-48/-1)   tta gca tct aga cgt tct atg atg atg tcc tat gct gca gaa cgt tcc

L A S R R S M M M S Y A A E R S

L A S R R S M M M S Y A A E R S

SON NEW

h(+1/+48)   atg gcg acc aac atc gag cag att ttt agg tct ttc gtg gtc agt aaa
            ||| ||| || || ||| ||| ||| || || ||| ||| ||| ||| ||| ||| |||
m(+1/+48)   atg gcg gcc gac atc gag cag gtt ttc agg tct ttc gtg gtc agt aaa

             M   A   T   N   I   E   Q   I   F   R   S   F   V   V   S   K
                     -   -               -
             M   A   A   D   I   E   Q   V   F   R   S   F   V   V   S   K

h(-48/-1)   gag cct gga gga cta gcg agg agg agt tga gag aac gga gcg gac gcc
            ||| ||| ||| ||| ||| ||| ||| || ||| ||| ||| ||| ||| ||| ||| |||
m(-48/-1)   gag cct gga gga cta gcg agg agt agt tga gag aac gga gcg gac gcc

             E   P   G   G   L   A   R   R   S stop E   N   G   A   D   A
                                         -
             E   P   G   G   L   A   R   S   S stop E   N   G   A   D   A

***

TFF3 OLD

h(+1/+48)   atg gct gcc aga gcg ctc tgc atg ctg ggg ctg gtc ctg gcc ttg ctg
            ||| |    || ||| || ||| ||   |   ||   | || ||   |       |
m(+1/+48)   atg gag acc aga gcc ctc tgg cta atg ctg ttg gtg gtc ctg gtt gct

             M   A   A   R   A   L   C   M   L   G   L   V   L   A   L   L
                 -   -               -   -   -   -           -   -   -   -
             M   E   T   R   A   L   W   L   M   L   L   V   V   L   V   A

h(-48/-1)   tgg acc atg aag cga gtc ctg agc tgc gtc ccg gag ccc acg gtg gtc
            ||    | |      |        ||     ||    |              | |   | |
m(-48/-1)   tgt gac ctt gca cat cct gtg cag tgg tcc tga agc ttg cct gct gcc

W T M K R V L S C V P E P T V V

C D L A H P V Q W S _ S L P A A

TFF3 NEW

h(+1/+48) atg cag gag aga aca gga gca gcc aca gcc agg agg gag agc ctt ccc

m(-48/-1) (not available)

h(-48/-1) acc tct ccc ctt tgg gag aga aaa act gtc tgg gag ctt gac aaa ggc

m(-48/-1) (not available)